From 033469db323de0b3bf3b28dc3e043e85c6d4c89a Mon Sep 17 00:00:00 2001 From: Bryan Roessler Date: Sat, 3 Aug 2024 23:46:26 -0400 Subject: [PATCH] Make R library if it doesn't exist --- workflow/qhtcp-workflow | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflow/qhtcp-workflow b/workflow/qhtcp-workflow index 164c0bec..39007a81 100755 --- a/workflow/qhtcp-workflow +++ b/workflow/qhtcp-workflow @@ -530,7 +530,7 @@ install_dependencies() { depends_rpm=(graphviz pandoc pdftk-java gd-devel perl-CPAN shdoc nano rsync coreutils libcurl-devel openssl-devel) depends_deb=(graphviz pandoc pdftk-java libgd-dev perl shdoc nano rsync coreutils libcurl-dev openssl-dev) depends_brew=(graphiz pandoc gd pdftk-java shdoc nano perl rsync coreutils) - depends_perl=(File::Map Sub::Uplevel ExtUtils::Config ExtUtils::PkgConfig Module::Build::Tiny IPC::Run GD GO::TermFinder) + depends_perl=(Test::Warn File::Map Sub::Uplevel ExtUtils::Config ExtUtils::PkgConfig IPC::Run Module::Build::Tiny IPC::Run GD GO::TermFinder) depends_r=(BiocManager ontologyIndex ggrepel tidyverse sos openxlsx ggplot2 plyr extrafont gridExtra gplots stringr plotly ggthemes pandoc rmarkdown plotly htmlwidgets)