diff --git a/workflow/templates/easy/p4loop8c.m b/workflow/templates/easy/p4loop8c.m index 32a02853..fe864d15 100755 --- a/workflow/templates/easy/p4loop8c.m +++ b/workflow/templates/easy/p4loop8c.m @@ -5,39 +5,32 @@ function[p4L4,... TmpexpScanIntens00,TmpFexpScanSpots00,TmpFexpScanBMtp00,TmpanlZoneRefs00,~,tifFileLstP4,pathname,ImParMat, ... numRows,numCols,scLst,resDir,expDir, p4L00,TmpexpScanIntens4,TmpFexpScanSpots4,TmpFexpScanBMtp4,TmpanlZoneRefs4, Tmpsbdg00, Tmpsbdg4) p4L0=p4L00; -TmpexpScanIntens0= TmpexpScanIntens00; -TmpFexpScanSpots0= TmpFexpScanSpots00; -TmpFexpScanBMtp0= TmpFexpScanBMtp00; -TmpanlZoneRefs0= TmpanlZoneRefs00; +TmpexpScanIntens0=TmpexpScanIntens00; +TmpFexpScanSpots0=TmpFexpScanSpots00; +TmpFexpScanBMtp0=TmpFexpScanBMtp00; +TmpanlZoneRefs0=TmpanlZoneRefs00; Tmpsbdg0= Tmpsbdg00; -%resDir %for debugging -%START PARFOR PARFOR PARFOR PARFOR PARFOR PARFOR PARFOR PARFOR PARFOR PARFOR -%************************************************************************************************************************ -%---------------Global Parfor Loop----------------------------------------- -%for scCount=1:numScans + +% for scCount=1:numScans if SWsingleSc==1 parforArg=0; else parforArg= inf; end -%for (scCount=1:numScans) + +% for (scCount=1:numScans) parfor (scCount=1:numScans,parforArg) - scCount %for debugging -p4L0= cell(18,1); -[p4L3,... - TmpexpScanIntens3,TmpFexpScanSpots3,TmpFexpScanBMtp3,TmpanlZoneRefs3,Tmpsbdg3]= ... - par4GblFnc8c(parMat,tptLength,numScans,selScanNumLst,SWsingleSc,Fflg,PTmapPos,optCirMask,diaExt,doCircle,cirPixA,cirMask,width, ... - TmpexpScanIntens0,TmpFexpScanSpots0,TmpFexpScanBMtp0,TmpanlZoneRefs0,scCount,tifFileLstP4,pathname,ImParMat, ... - numRows,numCols, scLst,resDir,expDir, p4L0,Tmpsbdg0); + scCount % for debugging + p4L0=cell(18,1); + [p4L3,TmpexpScanIntens3,TmpFexpScanSpots3,TmpFexpScanBMtp3,TmpanlZoneRefs3,Tmpsbdg3]= ... + par4GblFnc8c(parMat,tptLength,numScans,selScanNumLst,SWsingleSc,Fflg,PTmapPos,optCirMask,diaExt,doCircle,cirPixA,cirMask,width, ... + TmpexpScanIntens0,TmpFexpScanSpots0,TmpFexpScanBMtp0,TmpanlZoneRefs0,scCount,tifFileLstP4,pathname,ImParMat, ... + numRows,numCols, scLst,resDir,expDir, p4L0,Tmpsbdg0); - p4L4(:,scCount)= p4L3; %(:,scCount); - TmpexpScanIntens4(scCount)= TmpexpScanIntens3; - TmpFexpScanSpots4(scCount)= TmpFexpScanSpots3; - TmpFexpScanBMtp4(scCount)= TmpFexpScanBMtp3; - TmpanlZoneRefs4(scCount)= TmpanlZoneRefs3; - -Tmpsbdg4(scCount)= Tmpsbdg3; - %End of Global Scan loop******************************************************************************************* -%************************************************************************************************************************** + p4L4(:,scCount)=p4L3; % (:,scCount); + TmpexpScanIntens4(scCount)=TmpexpScanIntens3; + TmpFexpScanSpots4(scCount)=TmpFexpScanSpots3; + TmpFexpScanBMtp4(scCount)=TmpFexpScanBMtp3; + TmpanlZoneRefs4(scCount)=TmpanlZoneRefs3; + Tmpsbdg4(scCount)=Tmpsbdg3; end -%---------------END OF Global Parfor Loop-----------------------------------------%************************************************************************************************************************** \ No newline at end of file