From 72610d282d2027e508283bd3ffafb2dea710b801 Mon Sep 17 00:00:00 2001 From: Bryan Roessler Date: Thu, 1 Aug 2024 22:44:51 -0400 Subject: [PATCH] Add cpan package to dependencies --- workflow/qhtcp-workflow | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/workflow/qhtcp-workflow b/workflow/qhtcp-workflow index cdd0aa18..89441ffe 100755 --- a/workflow/qhtcp-workflow +++ b/workflow/qhtcp-workflow @@ -423,9 +423,9 @@ install_dependencies() { debug "Running: ${FUNCNAME[0]}" "$@" # Dependency arrays - depends_rpm=(graphviz pandoc pdftk-java gd-devel shdoc nano rsync coreutils) - depends_deb=(graphviz pandoc pdftk-java libgd-dev shdoc nano rsync coreutils) - depends_brew=(graphiz pandoc gd pdftk-java shdoc nano rsync coreutils) + depends_rpm=(graphviz pandoc pdftk-java gd-devel perl-CPAN shdoc nano rsync coreutils) + depends_deb=(graphviz pandoc pdftk-java libgd-dev perl shdoc nano rsync coreutils) + depends_brew=(graphiz pandoc gd pdftk-java shdoc nano perl rsync coreutils) depends_perl=(File::Map ExtUtils::PkgConfig GD GO::TermFinder) depends_r=(BiocManager ontologyIndex ggrepel tidyverse sos openxlsx ggplot2 plyr extrafont gridExtra gplots stringr plotly ggthemes pandoc rmarkdown