diff --git a/qhtcp-workflow/apps/r/calculate_interaction_zscores.R b/qhtcp-workflow/apps/r/calculate_interaction_zscores.R index 3f493767..b1c2c799 100644 --- a/qhtcp-workflow/apps/r/calculate_interaction_zscores.R +++ b/qhtcp-workflow/apps/r/calculate_interaction_zscores.R @@ -339,9 +339,15 @@ calculate_interaction_scores <- function(df, max_conc, variables, group_vars = c } generate_and_save_plots <- function(output_dir, file_name, plot_configs, grid_layout = NULL) { + + message("Generating html and pdf plots for: ", file_name, ".pdf|html") + plots <- lapply(plot_configs, function(config) { df <- config$df + print(df %>% select(any_of(c("OrfRep", "Plate", "scan", "Col", "Row", "num", "OrfRep", "conc_num", "conc_num_factor", + "delta_bg_tolerance", "delta_bg", "Gene", "L", "K", "r", "AUC", "NG", "DB"))), n = 100) + # Define aes mapping based on the presence of y_var aes_mapping <- if (is.null(config$y_var)) { aes(x = !!sym(config$x_var), color = as.factor(!!sym(config$color_var)))