From fba8fa14f10b32fd6a773d4e1a9f83de31aa261e Mon Sep 17 00:00:00 2001
From: Bryan Roessler <bryanroessler@gmail.com>
Date: Fri, 26 Jul 2024 10:25:09 -0400
Subject: [PATCH] EASYconsole.m debugging

---
 workflow/templates/easy/EASYconsole.m | 17 +++++++++--------
 1 file changed, 9 insertions(+), 8 deletions(-)

diff --git a/workflow/templates/easy/EASYconsole.m b/workflow/templates/easy/EASYconsole.m
index 5133bc6d..0112f0ac 100644
--- a/workflow/templates/easy/EASYconsole.m
+++ b/workflow/templates/easy/EASYconsole.m
@@ -77,6 +77,11 @@ function varargout = EASYconsole(varargin)
     disp(strcat('Using EASY script directory: ', easyDir, ' from hardcoded default'));
   end
 
+  % Now that we have easyDir let's add it to the path just to be safe
+  % TODO I have no idea if this is necessary or effective but we'll see
+  % I could image it would reduce some weird matlab errors?
+  addpath(easyDir);
+
   if exist('EASY_RESULTS_DIR', 'env')
     easyResultsDir=fullfile(get_env('EASY_RESULTS_DIR'));
     disp(strcat('Using project prefix: ', easyResultsDir, ' from environment variable EASY_RESULTS_DIR'))
@@ -246,7 +251,7 @@ function NewExpDat_Callback(~, ~, ~)
     for i = 1:length(templates)
       d = dirs{i};
       if ~exist(fullfile(easyResultsDir, d), 'dir')
-        copyfile((fullfile(,d)), (fullfile(easyResultsDir,d)));
+        copyfile((fullfile(easyDir,d)), (fullfile(easyResultsDir,d)));
       end
     end
 
@@ -312,7 +317,6 @@ function LoadDatFile_Callback(~, ~, ~)
       end
     end
   catch
-    returnStartDir
   end
 
   clear scan   
@@ -334,7 +338,6 @@ function runPlateMapPintool_Callback(~, ~, ~)
   try   
     NImapPT
   catch ME
-    returnStartDir
     EASYconsole
   end
 end
@@ -343,7 +346,6 @@ function NImCFcombo_Callback(~, ~, ~)
   try   
     par4Gbl_Main8c
   catch 
-    returnStartDir
     EASYconsole
   end
 end
@@ -352,7 +354,6 @@ function runPlateImAnal_Callback(~, ~, ~)
   try   
     NImStartupOnly
   catch ME
-    returnStartDir 
     EASYconsole
   end
 end
@@ -362,7 +363,6 @@ function PlateCFit_Callback(~, ~, ~)
   try
     NCstart  
   catch ME
-    returnStartDir
   end
 end
 
@@ -374,7 +374,8 @@ end
 
 function runDMPexcel_Callback(~, ~, ~)
   try
-    DMPexcel2mat_2024winLinix %DMPexcel2mat_2023winLinix
+    % DMPexcel2mat_2024winLinix %DMPexcel2mat_2023winLinix
+    DMPexcel2mat % TODO Can't find above so using what I have available
   catch ME
     returnStartDir
     EASYconsole
@@ -386,7 +387,7 @@ function runResults_DBcombo_Callback(~, ~, ~)
     DgenResults240430 %similar but semicolons removed to restore so cmdLine display info.
     %Dgen241010qhtcp %par4global -convert 1x1cell of 384cells to be like previous 1x384 cells CFparameter
   catch ME
-    disp('Error in DgenResults240430')
+    disp(strcat('Error in DgenResults240430: ', ME.message))
     EASYconsole
   end
 end