 Bryan Roessler
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28edcd5f33
Temporarily print plotly plots separately for debug
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vor 6 Monaten |
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Bryan Roessler
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3d11ffbdbc
Add pre-calculated error bars to scatter plots
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vor 6 Monaten |
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Bryan Roessler
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039c6c1388
Restore default aes colors
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vor 6 Monaten |
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Bryan Roessler
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2f42357aa1
Simplify plot config format
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vor 6 Monaten |
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Bryan Roessler
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5d25b3c3ef
Add jittering to interaction plots
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vor 6 Monaten |
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Bryan Roessler
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c18f70a08a
Refactor interaction plots to handle both reference and deletion scoring
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vor 6 Monaten |
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Bryan Roessler
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f005155d08
Improve interactions grids with gridExtra
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vor 6 Monaten |
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Bryan Roessler
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376a299066
Use sd bars, not se, in plate analysis plots
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vor 6 Monaten |
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Bryan Roessler
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51aa2589be
Use precomputed se values with Bessel's correction
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vor 6 Monaten |
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Bryan Roessler
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fe9dfd9e38
Plot tweaks for before QC
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vor 6 Monaten |
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Bryan Roessler
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6256127279
Break out aes mappings
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vor 6 Monaten |
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Bryan Roessler
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a45b977b0d
Add theme_publication() to generate_and_save_plots()
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vor 6 Monaten |
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Bryan Roessler
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453c834566
Copy original theme eactly and apply to plots
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vor 7 Monaten |
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Bryan Roessler
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0d9f68537d
Copy over more theme elements
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vor 7 Monaten |
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Bryan Roessler
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4cab528772
Sort experiments for analysis
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vor 7 Monaten |
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Bryan Roessler
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302110bb9b
Switch from theme_gray() to theme_foundation()
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vor 7 Monaten |
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Bryan Roessler
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a4d08ad1a2
Use if_all
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vor 7 Monaten |
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Bryan Roessler
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cbe363e8ad
Filter non-finite data for plate analysis plots
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vor 7 Monaten |
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Bryan Roessler
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1661f913d8
Standardize output filenames
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vor 7 Monaten |
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Bryan Roessler
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b35966cb88
Enable QC plots for comparison
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vor 7 Monaten |
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Bryan Roessler
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964c1528c3
Remove references to ranked df
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vor 7 Monaten |
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Bryan Roessler
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c42e13d09f
Simplify y-limits
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vor 7 Monaten |
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Bryan Roessler
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57ff7698a3
Fix Z_lm calculations
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vor 7 Monaten |
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Bryan Roessler
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ad6e10e67d
Remove superfluous filter function
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vor 7 Monaten |
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Bryan Roessler
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fbbe351cbb
Move ranks into rank_plots function
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vor 7 Monaten |
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Bryan Roessler
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0836dc70d2
Improve NA filtering
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vor 7 Monaten |
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Bryan Roessler
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94c477ca28
Fix bg data references
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vor 7 Monaten |
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Bryan Roessler
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81174db065
Put bg_stats into its own df to be reused
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vor 7 Monaten |
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Bryan Roessler
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4741996694
Align df handling closer to original script
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vor 7 Monaten |
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Bryan Roessler
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eaf75f8892
Preserve conc cols for later
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vor 7 Monaten |
