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- Updating files; see 'Updating Q-HTCP_SourceFiles'
- some of the updated files that were downloaded from the places sited have different extensions and these were changed to match the older file names (e.g., .tab instead of .tsv).
- I changed the ORF list files in the 'code' folder of StudiesQHTCP to match those in the REMc folder. The file names were slightly different. I updated the AllOrfs, KO_NoDamps, and DampsOnly files to be consistent with the SGD systematic names in the final genome edition. I think that 'ORFs_w_DAmP_list' has the same name as before. The other two were added, so there shouldn't be a conflict, but we may want to use those other files in some cases where they are needed but not being used.
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