server-scripts/qhtcp-workflow/apps/matlab/ezview/EZmultiExLoad.m

% EZmultiExLoad
% Calls to EZVimDisplay (ln 185)  EZmultiGeneRFsLst (ln213)  EZdiagRFsSheet(ln218)
% TODO this file could use some elseif's

global Exp
global zonePB
global Expaa
global Expbb
global exDlst
global exFolder

% Load .mat file
expN=zonePB; % added to accomodate AppDesigner limitations 230821
Exp(expN).UgeneCnt=0;
Exp(expN).DexpLength=size(matFile,2); DexpLength=size(matFile,2);
for n=1:Exp(expN).DexpLength % size(matFile,2)
  if expN==1
    orfLstSel=get(handles.GeneOrfTog,'value');
  end
  if expN==2
    orfLstSel=get(handles.GeneOrfTog,'value');
  end
  if expN==3
    orfLstSel=get(handles.GeneOrfTog,'value');
  end
  Exp(expN).Dexp(n).srtGnLst={('CheckMP/MPDMfile')};
  Exp(expN).Dexp(n).srtOrfLst={('CheckMP/MPDMfile')};
  set(handles.listboxGnOrf,'value',1)  %Fix accomodation for bug in App Designer .. .wlapp converter 230918
  set(handles.listboxGnOrf,'string',cellstr([{'Failed To Load'}; {' '}]));
  % try
  ExpOutmat=matFile(n)
  load(char(ExpOutmat));
  %cd(scansDir)
  %cd ..;
  %resDir=pwd;
  Exp(expN).Dexp(n).resDir=cell2mat(resDir(n));
  cd(Exp(expN).Dexp(n).resDir)
  cd ..;
  ExpPath=pwd;
  Exp(expN).Dexp(n).ExpFoldr=ExpPath;
  cd(w)
  % Experiment LOADs 
  load(fullfile(Exp(expN).Dexp(n).ExpFoldr,'MasterPlateFiles','MPDMmat.mat')) 
  load(fullfile(Exp(expN).Dexp(n).resDir,'Fotos','Coordinates')) 
  load(fullfile(Exp(expN).Dexp(n).resDir,'Fotos','anlZones'))
  load(fullfile(Exp(expN).Dexp(n).resDir,'Fotos','BGatTpts'))
  load(fullfile(Exp(expN).Dexp(n).resDir,'PTmats','NImParameters'))
  % Backup for cond. sothat failure to load is recovered back prev. ExpJob data 
  % test in temp 
  Exp(expN).Dexp(n).temp.DM=DM;
  Exp(expN).Dexp(n).temp.MP=MP;
  Exp(expN).Dexp(n).temp.scan=scan;
  Exp(expN).Dexp(n).temp.FexpScanSpots=FexpScanSpots;
  Exp(expN).Dexp(n).temp.FexpScanBMtp=FexpScanBMtp;
  Exp(expN).Dexp(n).temp.anlZoneRefs=anlZoneRefs;
  Exp(expN).Dexp(n).temp.ImParMat=ImParMat;
  Exp(expN).Dexp(n).DM=Exp(expN).Dexp(n).temp.DM;
  Exp(expN).Dexp(n).MP=Exp(expN).Dexp(n).temp.MP;
  Exp(expN).Dexp(n).scan=Exp(expN).Dexp(n).temp.scan;
  Exp(expN).Dexp(n).FexpScanSpots=Exp(expN).Dexp(n).temp.FexpScanSpots;
  Exp(expN).Dexp(n).FexpScanBMtp=Exp(expN).Dexp(n).temp.FexpScanBMtp;
  Exp(expN).Dexp(n).anlZoneRefs=Exp(expN).Dexp(n).temp.anlZoneRefs;
  Exp(expN).Dexp(n).ImParMat=Exp(expN).Dexp(n).temp.ImParMat;
  Exp(expN).Dexp((Exp(expN).DexpLength+1):end)=[];
  Exp(expN).Dexp(n).temp=[];
end

% Load First new ExpJOb
if expN==1
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3));  %size(FexpScanBMtp{1,1},3);
  set(handles.MPsldr1,'max',MPnum);  %length(MP)
  set(handles.DMsldr1,'max',length(DM.drug));
  set(handles.Tptsldr1,'max',tPtsSize);

  % MPnum=length(Exp(expN).Dexp(1).MP);
  set(handles.MPsldr1,'min',1,'max',MPnum)
  DMnum=length(Exp(expN).Dexp(1).DM.drug);
  set(handles.DMsldr1,'min',1,'max',DMnum)  
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3));
  set(handles.Tptsldr1,'min',1,'max',tPtsSize)

  set(handles.MPsldr1,'value',1)
  set(handles.DMsldr1,'value',1)
  set(handles.Tptsldr1,'value',1)
  set(handles.MPed1,'string','1')
  set(handles.DMed1,'string','1')
  set(handles.Tpted1,'string','1')
  set(handles.MPsldr1,'SliderStep',[1/MPnum 1/MPnum]);  % [1/length(MP) 1/length(MP)])
  set(handles.DMsldr1,'SliderStep',[1/length(DM.drug) 1/length(DM.drug)]);
  set(handles.Tptsldr1,'SliderStep',[1/tPtsSize 1/tPtsSize]);

  set(handles.DN1,'value',1)
  set(handles.DN1,'string',1)
end
if expN==2,
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3)); % size(FexpScanBMtp{1,1},3);
  set(handles.MPsldr2,'max',MPnum);
  set(handles.DMsldr2,'max',length(DM.drug));
  set(handles.Tptsldr2,'max',tPtsSize);
  % MPnum=length(Exp(expN).Dexp(1).MP);
  set(handles.MPsldr2,'min',1,'max',MPnum)  % length(MP))
  DMnum=length(Exp(expN).Dexp(n).DM.drug);
  set(handles.DMsldr2,'min',1,'max',DMnum)  
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3));
  set(handles.Tptsldr2,'min',1,'max',tPtsSize)

  set(handles.MPsldr2,'value',1)
  set(handles.DMsldr2,'value',1)
  set(handles.Tptsldr2,'value',1)
  set(handles.MPed2,'string','1')
  set(handles.DMed2,'string','1')
  set(handles.Tpted2,'string','1')
  set(handles.MPsldr2,'SliderStep',[1/MPnum 1/MPnum]);  %1/length(MP) 1/length(MP)])
  set(handles.DMsldr2,'SliderStep',[1/length(DM.drug) 1/length(DM.drug)]);
  set(handles.Tptsldr2,'SliderStep',[1/tPtsSize 1/tPtsSize]);

  set(handles.DN2,'value',1)
  set(handles.DN2,'string',1)
end

if expN==3
  % Exp(3).traceN=0;
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3)); % size(FexpScanBMtp{1,1},3);
  set(handles.MPsldr3,'max',MPnum);
  set(handles.DMsldr3,'max',length(DM.drug));
  set(handles.Tptsldr3,'max',tPtsSize);
  % MPnum=length(Exp(expN).Dexp(1).MP);
  set(handles.MPsldr3,'min',1,'max',MPnum)
  DMnum=length(Exp(expN).Dexp(1).DM.drug);
  set(handles.DMsldr3,'min',1,'max',DMnum)  
  tPtsSize=size(Exp(expN).Dexp(1).FexpScanBMtp{1,1},(3));
  set(handles.Tptsldr3,'min',1,'max',tPtsSize)
  set(handles.MPsldr3,'value',1)
  set(handles.DMsldr3,'value',1)
  set(handles.Tptsldr3,'value',1)
  set(handles.MPed3,'string','1')
  set(handles.DMed3,'string','1')
  set(handles.Tpted3,'string','1')
  set(handles.MPsldr3,'SliderStep',[1/MPnum 1/MPnum]); % 1/length(MP) 1/length(MP)])
  set(handles.DMsldr3,'SliderStep',[1/length(DM.drug) 1/length(DM.drug)]);
  set(handles.Tptsldr3,'SliderStep',[1/tPtsSize 1/tPtsSize]);
  set(handles.DN3,'value',1)
  set(handles.DN3,'string',1)
end

if expN==1
  set(handles.GeneOrfLoc1,'string',{''});
  set(handles.graphStrLoc1,'string',{''});
  cla(handles.Paxes1)
end 
if expN==2
  set(handles.GeneOrfLoc2,'string',{''});
  set(handles.graphStrLoc2,'string',{''});
  cla(handles.Paxes2)
end
if expN==3
  set(handles.GeneOrfLoc3,'string',{''});
  set(handles.graphStrLoc3,'string',{''})
  cla(handles.Paxes3)
end

Exp(expN).Dexp(1).srtGnLst={('CheckMP/MPDMfile')};
Exp(expN).Dexp(1).srtOrfLst={('CheckMP/MPDMfile')};
set(handles.listboxGnOrf,'value',1)  %Fix accomodation for bug in App Designer .. .wlapp converter 230918
set(handles.listboxGnOrf,'string',Exp(expN).Dexp(1).srtGnLst)
set(handles.listboxGnOrf,'string',Exp(expN).Dexp(1).srtOrfLst)

EZVimDisplay

usrRefFg=0;
prompt={'Enter GeneName to use as Reference:',...
  'Enter Specifics Term if used to futher specify Reference '}       
dlg_title='User Reference Input';
num_lines=1;
def={'RF1','None'};
answer=inputdlg(prompt,dlg_title,num_lines,def);
if iscell(answer(1))
  rfGene=cell2mat(answer(1));
else
  rfGene=answer(1);
end

if ~strcmpi(rfGene,'RF1')|| ~strcmpi(rfGene,'RF2'), usrRefFg=1; end
rfSpec=answer(2); % if strcmpi(answer(2),'None'), rfSpec=''; end
rfGnSp=strcat(rfGene,rfSpec);
if strcmpi(rfSpec,'None'), rfGnSp={strcat(rfGene,'-')}; end

% Added 17-1023 For User Addition of Gene Composites to ListBox 
Expaa{expN,1}=[]
Expbb{expN,1}=[];
    
for n=1:size(matFile,2)
  try
    EZmultiGeneRFsLst
  catch
    msg='EZmultiGeneRFLst failed possibly Too Few non-zero Median spots' 
  end
  EZdiagRFsSheet
  Exp(expN).Dexp(n).RFrnames=rnames;
  Exp(expN).Dexp(n).RFdata=data;
  RFconfig=0;
  if sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmean')) ...
  && ~isempty(Exp(expN).Dexp(n).RFmean) ...
  && sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmeanG')) ...
  && isempty(Exp(expN).Dexp(n).RFmeanG)
    RFconfig=1;
  end
  if sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmean'))==0 ...
  || isempty(Exp(expN).Dexp(n).RFmean) ...
  && sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmeanG')) ...
  && ~isempty(Exp(expN).Dexp(n).RFmeanG)
    RFconfig=2;
  end
  if sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmean')) ...
    && ~isempty(Exp(expN).Dexp(n).RFmean) ...
    && sum(ismember(fieldnames(Exp(expN).Dexp(n)),'RFmeanG')) ...
    && ~isempty(Exp(expN).Dexp(n).RFmeanG)
      RFconfig=3;
  end
  Exp(expN).RFconfig=RFconfig;
  Exp(expN).Dexp(n).RFconfig=RFconfig;
  try msgBadGeneName
  catch, end
  try
    Exp(expN).Dexp(n).resetHtmpTg =5;  %Exp(expN).resetHtmpTg =5; 
    if RFconfig==0
      RFconfigMsg='No RF1 references in this Experiment Job'
      Exp(expN).Dexp(n).resetHtmpTg =3; %Exp(expN).resetHtmpTg =3; 
    end
  catch
  end
end

% Auto Select Zone And Load Listboxgnorf Data
DexpN=1;
zeroCLn=zeros(1,DMnum);
Exp(expN).expLoadCnt=Exp(expN).expLoadCnt+1; expLdCnt=Exp(expN).expLoadCnt;
if expN==1  % Adapted to accomodate AppDesigner 230821 
  set(handles.zonePB1,'value',1)
  set(handles.zonePB2,'value',0)
  set(handles.zonePB3,'value',0)
  set(handles.zonePB1,'BackgroundColor',[1.0 0.6 0.6])
  set(handles.zonePB2,'BackgroundColor',[1.0 1.0 1.0])
  set(handles.zonePB3,'BackgroundColor',[1.0 1.0 1.0]) 
  orfLstSel=get(handles.GeneOrfTog,'value')
  if orfLstSel==1
    set(handles.listboxGnOrf,'string',Exp(1).Dexp(1).srtOrfLst)   
  else
    set(handles.listboxGnOrf,'string',Exp(1).Dexp(1).srtGnLst)
  end
  DNLaxes1=handles.DNLaxes1;
  Exp(1).hzeroCLn(expLdCnt)=plot(DNLaxes1,zeroCLn,1:DMnum,'y');
end

if expN==2 % Adapted to accomodate AppDesigner 230821
  set(handles.zonePB1,'value',0)
  set(handles.zonePB3,'value',0)
  set(handles.zonePB2,'value',1)
  set(handles.zonePB2,'BackgroundColor',[1.0 0.6 0.6])
  set(handles.zonePB1,'BackgroundColor',[1.0 1.0 1.0])
  set(handles.zonePB3,'BackgroundColor',[1.0 1.0 1.0])
  orfLstSel=get(handles.GeneOrfTog,'value');
  if orfLstSel==1
    set(handles.listboxGnOrf,'string',Exp(2).Dexp(1).srtOrfLst)   
  else
    set(handles.listboxGnOrf,'string',Exp(2).Dexp(1).srtGnLst)
  end
  DNLaxes2=handles.DNLaxes2;
  Exp(2).hzeroCLn(expLdCnt)=plot(DNLaxes2,zeroCLn,1:DMnum,'y');
end

if expN==3  % Adapted to accomodate AppDesigner 230821
  set(handles.zonePB1,'value',0)
  set(handles.zonePB2,'value',0)
  set(handles.zonePB3,'value',1)
  set(handles.zonePB3,'BackgroundColor',[1.0 0.6 0.6]);
  set(handles.zonePB1,'BackgroundColor',[1.0 1.0 1.0]);
  set(handles.zonePB2,'BackgroundColor',[1.0 1.0 1.0]);
  orfLstSel=get(handles.GeneOrfTog,'value');
  if orfLstSel==1
    set(handles.listboxGnOrf,'string',Exp(3).Dexp(1).srtOrfLst)   
  else
    set(handles.listboxGnOrf,'string',Exp(3).Dexp(1).srtGnLst)
  end
  DNLaxes3=handles.DNLaxes3;
  Exp(3).hzeroCLn(expLdCnt)=plot(DNLaxes3,zeroCLn,1:DMnum,'y');
end

if Exp(4).interacPBsel==0  %if interaction "raw" don't show a center line
  for i=1:Exp(expN).expLoadCnt,
    try set(Exp(expN).hzeroCLn(i),'visible','off'); 
    catch
      catchissue='Ln521'
      i 
    end
  end
end

% HtMapTog 'string', 'Current user L/N' selection'
Exp(expN).Dexp(DexpN).spotIndx=[];
if expN==1,
  Exp(1).htmapPBsel=0;
  set(handles.HtMapTog1,'string','L')
  EZhtMap
end
if expN==2,
  Exp(2).htmapPBsel=0;
  set(handles.HtMapTog2,'string','L')
  EZhtMap
end
if expN==3,
  Exp(3).htmapPBsel=0;
  set(handles.HtMapTog3,'string','L')
  EZhtMap
end
htMapTogPBfg=0;