Bryan Roessler bryan
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bryan pushed to dev at bryan/installJRMC 2024-09-03 17:44:55 -04:00
90fad17267 Compare script version numbers for self update
bryan pushed to dev at bryan/installJRMC 2024-09-03 17:22:09 -04:00
da2aef16eb Increment dev version
bryan pushed to dev at bryan/installJRMC 2024-09-03 17:19:11 -04:00
21b3c20aea Add self-updater and some refactoring
bryan pushed to master at bryan/hartman-server 2024-09-02 16:05:52 -04:00
4311354325 Fix l_outside to match l_within df logic
40395d26e7 Use a single df for process_strains()
756075a7e5 Remove existing columns before join
66062438b5 Remove deprecated code and re-enable QC plots
65b273ffa1 Set SM to 0 by default
Compare 5 commits »
bryan pushed to master at bryan/hartman-server 2024-09-01 22:39:06 -04:00
d91a38004a Refactor out individual stats dataframes
bryan pushed to master at bryan/hartman-server 2024-09-01 21:50:42 -04:00
e915e77504 Refactor out calculate_bg_means
bryan pushed to master at bryan/hartman-server 2024-09-01 19:58:47 -04:00
6fe47421df Fix placement of l_witin_2sd_k
fd03fbb205 Add missing grouping var Gene
9627bcc69b Add missing grouping var Gene
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bryan pushed to master at bryan/hartman-server 2024-09-01 18:58:07 -04:00
3fbde2de24 Fix stats_bg dataframe grouping
bryan pushed to master at bryan/hartman-server 2024-09-01 18:50:59 -04:00
79175e7821 Fix output dir usage
f1cc7b8404 Left join summary stats df with input df
f4c9985e40 Fix dataframe mutation order
e1f57ff7d7 Add more informative output
c6c4870d46 Skip empty QC plots
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bryan pushed to master at bryan/hartman-server 2024-09-01 16:45:03 -04:00
6b1428a384 Add more output to main() to aid debug
bryan pushed to master at bryan/hartman-server 2024-09-01 16:31:16 -04:00
403a7490eb Move plotting further down main() to work on df
ddb7a98e50 Add helpful output to save_plots()
d61c7219d7 Add horizontal legend support to plotly
1fa8fc1552 Use as.factor(conc_num) for plots
a4de405b75 Use as.factor(scan) for box plots
Compare 12 commits »
bryan pushed to master at bryan/hartman-server 2024-09-01 03:19:15 -04:00
a484a2b104 Rollup for calculation_interaction_zscores refactor
05cd1a85d8 Auto-commit: apps/r/calculate_interaction_zscores5.R
ed1e3cf756 Auto-commit: apps/r/calculate_interaction_zscores5.R
9c48b25b42 Auto-commit: apps/r/calculate_interaction_zscores5.R
814cec8ca2 Auto-commit: apps/r/calculate_interaction_zscores5.R
Compare 10 commits »
bryan pushed to dev at bryan/installJRMC 2024-08-31 22:18:02 -04:00
410e34d629 Add temp debug
bryan pushed to dev at bryan/installJRMC 2024-08-31 22:14:28 -04:00
6afbff713e Add parseInput debug
bryan pushed to dev at bryan/installJRMC 2024-08-31 22:13:22 -04:00
35369a7d18 Add parseInput flags to debug
49090f72ef Release 1.2.2
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bryan pushed to master at bryan/installJRMC 2024-08-31 21:41:36 -04:00
49090f72ef Release 1.2.2
720e11d403 Try silencing buildah error on Ubuntu
2934b19819 Try silencing buildah error on Ubuntu
Compare 3 commits »
bryan pushed to dev at bryan/installJRMC 2024-08-31 21:39:14 -04:00
720e11d403 Try silencing buildah error on Ubuntu
bryan pushed to dev at bryan/installJRMC 2024-08-31 21:38:07 -04:00
2934b19819 Try silencing buildah error on Ubuntu
bryan pushed to dev at bryan/installJRMC 2024-08-31 21:17:34 -04:00
99cd98a691 Release 1.2.1
bryan pushed to master at bryan/installJRMC 2024-08-31 21:16:47 -04:00
99cd98a691 Release 1.2.1
2cf10fbf25 Update readme markdown
de1eeb194b Implement automatic repo selection
f96c2e25c0 Move dev back to dev version
b0d6d07a9a Remove legacy MC_STUB (now handled by package)
Compare 5 commits »