Add untracked files

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2024-08-03 23:05:35 -04:00
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# submodule mat_exp_frontend
# # @description Run the ExpFrontend.m program
# # This submodule:
# # * Pushes into the Study template directory (ExpTemplate)
# # * Prompts the user to run ExpFrontend.m
# # * Pops out
# # NOTES:
# # * ExpFrontend.m should be or is being rewritten
# mat_exp_frontend() {
# debug "Running: ${FUNCNAME[0]}"
# cat <<-EOF
# ExpFrontend.m was made for recording into a spreadsheet
# ('StudiesDataArchive.txt') the date and files used (i.e., directory paths to the
# !!Results files used as input for Z-interaction script) for each multi-experiment study.
# Run the front end MATLAB programs in the correct order (e.g., run front end in "exp1"
# folder to call the !!Results file for the experiment you named as exp1 in the StudyInfo.csv file)
# The GTA and pairwise, TSHeatmaps, JoinInteractions and GTF Heatmap scripts use this table
# to label results and heatmaps in a meaningful way for the user and others.
# The BackgroundSD and ZscoreJoinSD fields will be filled automatically according to user
# specifications, at a later step in the QHTCP study process.
# COpen MATLAB and in the application navigate to each specific /Exp folder,
# call and execute ExpFrontend.m by clicking the play icon.
# Use the "Open file" function from within Matlab.
# Do not double-click on the file from the directory.
# When prompted, navigate to the ExpJobs folder and the PrintResults folder within the correct job folder.
# Repeat this for every Exp# folder depending on how many experiments are being performed.
# The Exp# folder must correspond to the StudyInfo.csv created above.
# EOF
# script="ExpFrontend.m"
# if ! ((YES)) &&
# ask "Start MATLAB to run $script? This requires a GUI."; then
# $MATLAB -nosplash -r "$script"
# fi
# }