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Who even knows at this point

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This commit is contained in:
Bryan Roessler
2024-07-30 13:42:48 -04:00
parent fe9b338324
commit 79e3676ed3
38 changed files with 465 additions and 746 deletions
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16
workflow/apps/matlab/ezview/EZusrSelRefx.m
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@@ -4,7 +4,7 @@
try
if n==1 && ~exist('RF1scanN','var') && ~exist('RF2scanN','var') %change || &&
%{
prompt = {'Enter Masterplate Number(s) of Your Reference GeneName spots:',...
prompt={'Enter Masterplate Number(s) of Your Reference GeneName spots:',...
'Enter GeneName of Your Reference:'};
rfMPstr= cell2mat(answer(1));
rfMPcomas=strfind((cell2mat(answer(1))),',');
@@ -23,12 +23,12 @@ if n==1 && ~exist('RF1scanN','var') && ~exist('RF2scanN','var') %change || &&
usrMPs= answer(1);
refGene= answer(2);
%}
prompt = {'Enter GeneName to use as Reference:',...
prompt={'Enter GeneName to use as Reference:',...
'Enter Specifics Term if used to futher specify Reference '}
dlg_title = 'User Reference Input';
num_lines = 1;
def = {'None','Specifics Term'};
answer = inputdlg(prompt,dlg_title,num_lines,def);
dlg_title='User Reference Input';
num_lines=1;
def={'None','Specifics Term'};
answer=inputdlg(prompt,dlg_title,num_lines,def);
rfGenestr= cell2mat(answer(1));
rfSpec= cell2mat(answer(2));
@@ -172,8 +172,8 @@ uu= horzcat(uu,vv);
for d=1:DMnum
medianIndxG=[];
NZrfIndxG=[];
minG = min(nonzeros(vv(:,d)));
maxG = max(nonzeros(vv(:,d)));
minG=min(nonzeros(vv(:,d)));
maxG=max(nonzeros(vv(:,d)));
RFmeanG= mean(nonzeros(vv(:,d)));
RFstdG= std(nonzeros(vv(:,d)));
NZrfIndxG= find(nonzeros(vv(:,d)));