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Improve Study Info formatting

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Bryan Roessler
2024-08-04 22:12:31 -04:00
parent 735cd99644
commit 868e61d64f
1 changed files with 5 additions and 2 deletions
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7
workflow/qhtcp-workflow
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@@ -1973,6 +1973,8 @@ get_studies() {
next_study_entry="$empty_study,$PROJECT_SUFFIX,NA,NA,$INITIALS" next_study_entry="$empty_study,$PROJECT_SUFFIX,NA,NA,$INITIALS"
echo "${underline}Study Info${nounderline}"
if [[ ! -f $1 ]]; then if [[ ! -f $1 ]]; then
echo "Creating default $1" echo "Creating default $1"
echo "ExpNumb,ExpLabel,BackgroundSD,ZscoreJoinSD,AnalysisBy" > "$1" echo "ExpNumb,ExpLabel,BackgroundSD,ZscoreJoinSD,AnalysisBy" > "$1"
@@ -1985,11 +1987,12 @@ get_studies() {
Give each experiment labels to be used for the plots and specific files. Give each experiment labels to be used for the plots and specific files.
Enter the desired Experiment names and order them in the way you want them to appear in the REMc heatmaps Enter the desired Experiment names and order them in the way you want them to appear in the REMc heatmaps
Current study info file ($1) contents: Current study info file:
${underline}$1${nounderline}
$(cat "$1") $(cat "$1")
EOF EOF
echo ""
# Allow user to add/edit the study info file # Allow user to add/edit the study info file
if ! ((YES)); then if ! ((YES)); then