QHTCP debugging

workflow/qhtcp-workflow

@@ -1307,24 +1307,24 @@ qhtcp() {
 
 
   # Replacing ExpFrontend.m
-  choose_easy_results_dir
+  # choose_easy_results_dir
   
-  # Create studies archive file if missing
-  if ! [[ -d $STUDIES_ARCHIVE_FILE ]]; then
-    header=(StudyDate tStudyName StudyPath ExpNum ExpDate ExpPath ResultFile)
-    printf "%s\t" "${header[@]}" > "$STUDIES_ARCHIVE_FILE"
-  fi
-  # TODO Add them all to StudiesDataArchive?
-  # Probably better to always add and remove dupes later since each invocation "counts"?
-  for f in "${EASY_RESULTS_FILES[@]}"; do
-    for s in "${STUDIES_NUMS[@]}"; do
-      # Trying to match old ExpFrontend formatting
-      printf "%s\t" \
-        "${DATE//_/}" "$PROJECT_NAME" "$QHTCP_PROJECT_DIR" "Exp$s" \
-        "$PROJECT_DATE" "$PROJECT_SCANS_DIR" "$EASY_RESULTS_DIR" "${f##*/}" \
-        >> "$STUDIES_ARCHIVE_FILE"
-    done
-  done
+  # # Create studies archive file if missing
+  # if ! [[ -d $STUDIES_ARCHIVE_FILE ]]; then
+  #   header=(StudyDate tStudyName StudyPath ExpNum ExpDate ExpPath ResultFile)
+  #   printf "%s\t" "${header[@]}" > "$STUDIES_ARCHIVE_FILE"
+  # fi
+  # # TODO Add them all to StudiesDataArchive?
+  # # Probably better to always add and remove dupes later since each invocation "counts"?
+  # for f in "${EASY_RESULTS_FILES[@]}"; do
+  #   for s in "${STUDIES_NUMS[@]}"; do
+  #     # Trying to match old ExpFrontend formatting
+  #     printf "%s\t" \
+  #       "${DATE//_/}" "$PROJECT_NAME" "$QHTCP_PROJECT_DIR" "Exp$s" \
+  #       "$PROJECT_DATE" "$PROJECT_SCANS_DIR" "$EASY_RESULTS_DIR" "${f##*/}" \
+  #       >> "$STUDIES_ARCHIVE_FILE"
+  #   done
+  # done
 
   # Run R interactions script on all studies
   for s in "${STUDIES_NUMS[@]}"; do
@@ -1998,13 +1998,12 @@ get_studies() {
   if ! ((YES)); then
     for ((i=1; i<2; i++)); do
       cat <<-EOF
-				"Next entry suggestion: $next_study_entry"
+				Next entry suggestion: "$next_study_entry"
 
-				"Would you like to: 
+				Would you like to: 
 				* (a)dd the suggested entry
 				* (e)dit the StudyInfo.csv file manually in nano
 				* (c)ontinue?"
-
 			EOF
       read -r -p "(c): " response
       echo ""