Use if_all

This commit is contained in:
2024-09-25 16:59:52 -04:00
parent cbe363e8ad
commit a4d08ad1a2

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@@ -1043,7 +1043,7 @@ main <- function() {
df_na_stats <- ss$df_with_stats df_na_stats <- ss$df_with_stats
write.csv(df_na_ss, file = file.path(out_dir, "summary_stats_all_strains.csv"), row.names = FALSE) write.csv(df_na_ss, file = file.path(out_dir, "summary_stats_all_strains.csv"), row.names = FALSE)
# For plotting (ggplot warns on NAs) # For plotting (ggplot warns on NAs)
df_na_stats_filtered <- df_na_stats %>% filter(across(all_of(summary_vars), is.finite)) df_na_stats_filtered <- df_na_stats %>% filter(if_all(all_of(summary_vars), is.finite))
df_na_stats <- df_na_stats %>% df_na_stats <- df_na_stats %>%
mutate( mutate(