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Bryan Roessler
2024-07-27 19:13:51 -04:00
parent 9057970706
commit b8ebff2c18
5 changed files with 66 additions and 62 deletions
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38
workflow/apps/easy/EASYconsole.m
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@@ -50,23 +50,27 @@ function varargout = EASYconsole(varargin)
fprintf('Using scans directory: %s from environment variable SCANS_DIR\n', scansDir);
disp('This usually indicates that we are in module mode');
else
dirToScan=fullfile(parentDir,'..','ExpJobs'); % hardcoded relative to easy script dir TODO: if we change pj layout this will change
if exist(dirToScan, 'dir')
dirs=dir(fullfile(dirToScan, 'dir')); % filter for dirs only
[~, sortedIndices]=sort(datenum({dirs.date}), 'descend'); % sort by newest first
sortedDirs=dirs{sortedIndices};
scansDir=sortedDirs{1};
disp('Beginning in newest project scans directory');
fprintf('Using scans directory: %s from hardcoded relative path\n', scansDir);
disp('This usually indicates that we are in stand-alone mode without PROJECT or SCANS_DIR environment variables');
else
scansDir=fullfile(parentDir, '..', 'demo', '20240727_hartmanlab_demo_project');
if exist(scansDir, 'dir')
demo=1;
fprintf('Using scans directory: %s from hardcoded absolute path to demo project\n', scansDir);
else
fprintf('Error: demo project %s not found\n', scansDir);
disp('Attempting to continue but this may get ugly');
% Change these when modifying EASY_DIR in workflow
fprintf('Beginning parent scans directory search\n');
fprintf('This usually indicates that we are in stand-alone mode without PROJECT or SCANS_DIR environment variables\n');
dirsToScan={
fullfile(parentDir,'..', '..', 'scans'),
fullfile(parentDir, '..', '..', 'ExpJobs'),
fullfile('/mnt/data/scans'),
fullfile('/mnt/data/ExpJobs'),
fullfile(parentDir, '..', 'demo', '20240727_hartmanlab_demo_project')
};
for d=dirsToScan
if exist(d, 'dir')
subDirs=dir(d);
if ~isempty(subDirs)
fprintf('Found a non-empty parent scans directory in our list: %s\n', d);
fprintf('Scanning inside for a project scan directory\n');
[~, sortedIndices]=sort(datenum({dirs.date}), 'descend'); % sort by newest first
sortedDirs=dirs{sortedIndices};
scansDir=sortedDirs{1};
fprintf('Selected newest project scans directory: %s\n', scansDir);
end
end
end
end