Formatting

workflow/apps/easy/EASYconsole.m

@@ -50,23 +50,27 @@ function varargout = EASYconsole(varargin)
     fprintf('Using scans directory: %s from environment variable SCANS_DIR\n', scansDir);
     disp('This usually indicates that we are in module mode');
   else
-    dirToScan=fullfile(parentDir,'..','ExpJobs'); % hardcoded relative to easy script dir TODO: if we change pj layout this will change
+    % Change these when modifying EASY_DIR in workflow
-    if exist(dirToScan, 'dir')
+    fprintf('Beginning parent scans directory search\n');
-      dirs=dir(fullfile(dirToScan, 'dir')); % filter for dirs only
+    fprintf('This usually indicates that we are in stand-alone mode without PROJECT or SCANS_DIR environment variables\n');
+    dirsToScan={
+      fullfile(parentDir,'..', '..', 'scans'),
+      fullfile(parentDir, '..', '..', 'ExpJobs'),
+      fullfile('/mnt/data/scans'),
+      fullfile('/mnt/data/ExpJobs'),
+      fullfile(parentDir, '..', 'demo', '20240727_hartmanlab_demo_project')
+    };
+    for d=dirsToScan
+      if exist(d, 'dir')
+        subDirs=dir(d);
+        if ~isempty(subDirs)
+          fprintf('Found a non-empty parent scans directory in our list: %s\n', d);
+          fprintf('Scanning inside for a project scan directory\n');
           [~, sortedIndices]=sort(datenum({dirs.date}), 'descend'); % sort by newest first
           sortedDirs=dirs{sortedIndices};
           scansDir=sortedDirs{1};
-      disp('Beginning in newest project scans directory');
+          fprintf('Selected newest project scans directory: %s\n', scansDir);
-      fprintf('Using scans directory: %s from hardcoded relative path\n', scansDir);
+        end
-      disp('This usually indicates that we are in stand-alone mode without PROJECT or SCANS_DIR environment variables');
-    else
-      scansDir=fullfile(parentDir, '..', 'demo', '20240727_hartmanlab_demo_project');
-      if exist(scansDir, 'dir')
-        demo=1;
-        fprintf('Using scans directory: %s from hardcoded absolute path to demo project\n', scansDir);
-      else
-        fprintf('Error: demo project %s not found\n', scansDir);
-        disp('Attempting to continue but this may get ugly');
       end
     end
   end