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More EASYconsole work

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This commit is contained in:
Bryan Roessler
2024-07-30 12:29:13 -04:00
parent 50914e93c7
commit fe9b338324
6 changed files with 263 additions and 243 deletions
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1
workflow/apps/matlab/easy/DMPexcel2mat.m
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@@ -196,7 +196,6 @@ if ~exist(drugMediaFile, 'file') || isempty(drugMediaFile)
sortedFiles=dmFiles{sortedIndices};
drugMediaFile=sortedFiles{1};
fprintf('Using newest DrugMedia file: %s, skipping directory selection\n', drugMediaFile);
end
catch Me
% This can be silent, not really an error

10
workflow/apps/matlab/easy/EASYconsole.m
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@@ -65,10 +65,10 @@ function varargout = EASYconsole(varargin)
fprintf('WARNING: Running in standalone mode without PROJECT or PROJECT_SCANS_DIR environment variables (not recommended)\n');
fprintf('Beginning parent scans directory search\n');
dirsToScan={
fullfile(parentDir, '..', '..', 'scans'),
fullfile(parentDir, '..', '..', 'ExpJobs'),
fullfile('mnt','data','scans'),
fullfile('mnt','data', 'ExpJobs'),
fullfile(parentDir, '..', '..', 'scans')
fullfile(parentDir, '..', '..', 'ExpJobs')
fullfile('mnt','data','scans')
fullfile('mnt','data', 'ExpJobs')
fullfile(parentDir, '..', '..', 'templates', 'scans-demo')
};
for i=1:length(dirsToScan)
@@ -78,7 +78,7 @@ function varargout = EASYconsole(varargin)
pattern='^\d{6}_.*_.*';
matchedDirs={dirs(regexp(subDirs.name, pattern)).name};
if ~isempty(matchedDirs)
fprintf('Found a non-empty scans directory in our list: %s\n', char(d);
fprintf('Found a non-empty scans directory in our list: %s\n', char(d));
fprintf('Setting scansDir to %s\n', char(d));
scansDir=fullfile(d);
end