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1f682c9cbc
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Add more calcualtions to calculate_interaction_scores()
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2024-09-09 21:43:37 -04:00 |
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dc5501ea5d
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Improve generate_and_save_plots()
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2024-09-09 19:20:45 -04:00 |
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8f2f8d28f0
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Post plotting refactor
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2024-09-07 21:11:32 -04:00 |
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2407a752fc
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Before old rank plot removal
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2024-09-07 19:31:52 -04:00 |
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fcc6cdd2d4
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Pre sd/se fixes
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2024-09-06 01:22:15 -04:00 |
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40e0909a1e
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Split out simple vars in interaction scores
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2024-09-05 21:17:56 -04:00 |
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5ba669f880
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Replace existing summary stats in df
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2024-09-05 20:55:54 -04:00 |
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5808311e49
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No destructuring in base R
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2024-09-05 20:45:44 -04:00 |
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de599ed5b8
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Use a single N value
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2024-09-05 20:33:30 -04:00 |
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fa54503a5a
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Use a single N value
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2024-09-05 20:19:29 -04:00 |
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e82b6c5e59
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Use a single N value
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2024-09-05 20:18:36 -04:00 |
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6d678e661b
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Rename vars in data processing
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2024-09-05 19:56:10 -04:00 |
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738c792959
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Rename vars in data processing
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2024-09-05 19:54:36 -04:00 |
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3cfd324309
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Create and join dataframes in calculate_summary_stats
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2024-09-05 19:42:48 -04:00 |
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75ba5939a3
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Break out interaction plots
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2024-09-05 00:08:07 -04:00 |
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10660e40d0
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Fix pull var
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2024-09-04 22:38:59 -04:00 |
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58fd7453ce
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Fix sd vars
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2024-09-04 22:16:38 -04:00 |
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464fef2cfc
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Make calculate_summary_stats() more explicit
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2024-09-04 21:39:47 -04:00 |
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93c3b82140
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Before debugging
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2024-09-04 21:27:31 -04:00 |
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0eb460b4ee
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Add rank plots
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2024-09-04 20:49:39 -04:00 |
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919058fc3a
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Add generate_interaction_plots()
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2024-09-04 19:38:05 -04:00 |
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84c2732730
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Add titles to plots
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2024-09-04 02:10:00 -04:00 |
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0cb47077f8
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Remove aes_string()
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2024-09-04 02:07:23 -04:00 |
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d52903f8fa
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Before old plotting removal
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2024-09-04 02:03:23 -04:00 |
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111909914c
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Before calculate_interaction_scores() refactor
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2024-09-02 16:59:53 -04:00 |
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4311354325
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Fix l_outside to match l_within df logic
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2024-09-02 16:05:42 -04:00 |
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40395d26e7
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Use a single df for process_strains()
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2024-09-02 15:36:45 -04:00 |
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756075a7e5
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Remove existing columns before join
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2024-09-02 01:53:04 -04:00 |
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66062438b5
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Remove deprecated code and re-enable QC plots
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2024-09-01 22:54:54 -04:00 |
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65b273ffa1
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Set SM to 0 by default
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2024-09-01 22:53:33 -04:00 |
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d91a38004a
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Refactor out individual stats dataframes
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2024-09-01 22:38:59 -04:00 |
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e915e77504
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Refactor out calculate_bg_means
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2024-09-01 21:50:35 -04:00 |
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6fe47421df
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Fix placement of l_witin_2sd_k
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2024-09-01 19:58:40 -04:00 |
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fd03fbb205
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Add missing grouping var Gene
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2024-09-01 19:04:05 -04:00 |
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9627bcc69b
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Add missing grouping var Gene
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2024-09-01 19:03:39 -04:00 |
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3fbde2de24
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Fix stats_bg dataframe grouping
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2024-09-01 18:58:01 -04:00 |
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79175e7821
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Fix output dir usage
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2024-09-01 18:50:47 -04:00 |
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f1cc7b8404
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Left join summary stats df with input df
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2024-09-01 18:45:40 -04:00 |
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f4c9985e40
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Fix dataframe mutation order
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2024-09-01 17:54:08 -04:00 |
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e1f57ff7d7
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Add more informative output
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2024-09-01 17:33:40 -04:00 |
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c6c4870d46
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Skip empty QC plots
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2024-09-01 17:04:49 -04:00 |
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6b1428a384
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Add more output to main() to aid debug
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2024-09-01 16:44:57 -04:00 |
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403a7490eb
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Move plotting further down main() to work on df
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2024-09-01 16:31:04 -04:00 |
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ddb7a98e50
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Add helpful output to save_plots()
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2024-09-01 16:19:34 -04:00 |
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d61c7219d7
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Add horizontal legend support to plotly
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2024-09-01 16:16:07 -04:00 |
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1fa8fc1552
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Use as.factor(conc_num) for plots
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2024-09-01 15:40:29 -04:00 |
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a4de405b75
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Use as.factor(scan) for box plots
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2024-09-01 15:12:56 -04:00 |
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73a890cd36
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Make y conditional in generate_plot()
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2024-09-01 04:41:27 -04:00 |
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48311fda3b
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Add y var to stat_summary()
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2024-09-01 04:37:02 -04:00 |
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1bd3f9c4b4
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Add exception for delta_bg plot
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2024-09-01 04:35:02 -04:00 |
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