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25a5c7ff23
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Flatten means and sds for error bars
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2024-10-05 03:04:28 -04:00 |
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876970924b
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Make title size customizable
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2024-10-04 19:03:01 -04:00 |
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bbf2d630b9
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Plot interaction plots in chunks of 12 for pagination
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2024-10-04 18:42:58 -04:00 |
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83576d6e94
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Add grid.newpage() to paginate interaction plots
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2024-10-04 16:56:13 -04:00 |
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20c6e94727
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Add configurable page dimensions
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2024-10-04 16:41:33 -04:00 |
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320338316c
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Add missing calculation columns for Delta_L error bars
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2024-10-04 15:19:05 -04:00 |
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328fe1f116
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Move automatic nrow calculation to generate_and_save_plots
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2024-10-04 13:56:30 -04:00 |
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fdfe878774
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Move annotations to global scope
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2024-10-04 10:22:51 -04:00 |
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4a6890290e
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Fix plate analysis plots, make error bar use aes color by default
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2024-10-04 03:33:07 -04:00 |
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c4f398be82
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Move correlation modeling to calculate_interction_scores
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2024-10-04 02:30:13 -04:00 |
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b23c6dafef
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Fix interaction groupings
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2024-10-03 20:58:28 -04:00 |
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4b273db78d
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Try separating interaction dfs
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2024-10-03 12:43:03 -04:00 |
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f6958a0126
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Refactor calculate_interaction_scores again
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2024-10-03 10:16:46 -04:00 |
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8a8cdd7194
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Left join background data to calculations df
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2024-10-02 22:10:02 -04:00 |
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f435fa3f11
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Move max_conc into the dataframe to simplify args
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2024-10-02 19:11:30 -04:00 |
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4265663e17
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Use WT values for error bars
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2024-10-02 16:55:56 -04:00 |
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850a34d30f
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Add y-span for dynamic annotations
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2024-10-02 16:25:55 -04:00 |
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138ccf7fad
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Dynamically position interaction annotations
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2024-10-02 16:23:13 -04:00 |
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5332cf3fbc
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Paginate plot groups
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2024-10-02 15:26:14 -04:00 |
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744627fcb6
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Append plots to same file instead of overwriting
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2024-10-02 15:19:36 -04:00 |
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e856102851
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Fix default error bar calculations
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2024-10-02 14:05:39 -04:00 |
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964d2ad9b2
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Fix default error bar calculations
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2024-10-02 14:01:09 -04:00 |
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8e28accb80
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Add error bar color controls
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2024-10-02 13:49:49 -04:00 |
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6015f7faa8
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Add error bar color controls
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2024-10-02 13:47:57 -04:00 |
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df4c3352e3
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Fix interaction plot title OrfRep ref
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2024-10-02 13:34:17 -04:00 |
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211e793f00
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Fix error bars and points for interaction plots
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2024-10-02 13:07:07 -04:00 |
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5a3fcec55f
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Fix dataframe joining dimensionality
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2024-10-02 12:08:44 -04:00 |
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9769bae3d1
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Improve interaction plot groupings
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2024-10-02 11:02:40 -04:00 |
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ce32452920
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More nteraction score data structure improvements
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2024-10-02 06:08:46 -04:00 |
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9fee6bf8a5
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Fix interaction summarization
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2024-10-02 01:34:57 -04:00 |
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b0a41ac181
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Generate correlation lms separately
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2024-10-02 00:43:46 -04:00 |
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462d6070bd
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Fix discrete x_var mapping
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2024-10-01 18:54:19 -04:00 |
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1548dbf9c1
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Standardize plot groups
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2024-10-01 18:44:21 -04:00 |
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1e816e1a71
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Dynamically generate rank plot grids
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2024-10-01 15:28:13 -04:00 |
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e2479de3d7
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Use htmltools to combine html widgets into single file
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2024-10-01 15:24:25 -04:00 |
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8d398464e8
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Fix rank columns names
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2024-10-01 12:59:00 -04:00 |
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28edcd5f33
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Temporarily print plotly plots separately for debug
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2024-09-30 14:09:55 -04:00 |
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3d11ffbdbc
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Add pre-calculated error bars to scatter plots
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2024-09-30 02:21:54 -04:00 |
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039c6c1388
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Restore default aes colors
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2024-09-30 01:48:50 -04:00 |
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2f42357aa1
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Simplify plot config format
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2024-09-30 01:26:36 -04:00 |
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5d25b3c3ef
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Add jittering to interaction plots
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2024-09-29 18:36:55 -04:00 |
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c18f70a08a
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Refactor interaction plots to handle both reference and deletion scoring
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2024-09-29 17:39:17 -04:00 |
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f005155d08
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Improve interactions grids with gridExtra
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2024-09-29 02:15:06 -04:00 |
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376a299066
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Use sd bars, not se, in plate analysis plots
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2024-09-26 03:35:16 -04:00 |
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51aa2589be
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Use precomputed se values with Bessel's correction
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2024-09-26 02:52:09 -04:00 |
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fe9dfd9e38
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Plot tweaks for before QC
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2024-09-26 01:34:18 -04:00 |
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6256127279
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Break out aes mappings
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2024-09-25 22:45:39 -04:00 |
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a45b977b0d
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Add theme_publication() to generate_and_save_plots()
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2024-09-25 19:38:50 -04:00 |
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453c834566
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Copy original theme eactly and apply to plots
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2024-09-25 19:24:29 -04:00 |
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0d9f68537d
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Copy over more theme elements
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2024-09-25 18:59:37 -04:00 |
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