Commit Graph

247 Commits

Author SHA1 Message Date
403a7490eb Move plotting further down main() to work on df 2024-09-01 16:31:04 -04:00
ddb7a98e50 Add helpful output to save_plots() 2024-09-01 16:19:34 -04:00
d61c7219d7 Add horizontal legend support to plotly 2024-09-01 16:16:07 -04:00
1fa8fc1552 Use as.factor(conc_num) for plots 2024-09-01 15:40:29 -04:00
a4de405b75 Use as.factor(scan) for box plots 2024-09-01 15:12:56 -04:00
73a890cd36 Make y conditional in generate_plot() 2024-09-01 04:41:27 -04:00
48311fda3b Add y var to stat_summary() 2024-09-01 04:37:02 -04:00
1bd3f9c4b4 Add exception for delta_bg plot 2024-09-01 04:35:02 -04:00
77327c3986 Add exception for delta_bg plot 2024-09-01 04:13:14 -04:00
62e7cf2b60 Fix theme_grey() in theme_publication 2024-09-01 03:37:02 -04:00
9e2a2d16c5 Replace sgd_genes function with vectorized approach 2024-09-01 03:34:22 -04:00
00984b5060 Fix update_gene_names 2024-09-01 03:28:28 -04:00
a484a2b104 Rollup for calculation_interaction_zscores refactor 2024-09-01 03:18:42 -04:00
05cd1a85d8 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-09-01 03:03:53 -04:00
ed1e3cf756 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-09-01 02:31:49 -04:00
9c48b25b42 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-09-01 02:05:15 -04:00
814cec8ca2 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-08-31 16:40:01 -04:00
8973a3f0a7 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-08-31 15:15:35 -04:00
b139956df5 Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-08-31 14:59:38 -04:00
7b0b2c9bbd Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-08-31 12:32:05 -04:00
d460f1e51d Auto-commit: apps/r/calculate_interaction_zscores5.R 2024-08-31 03:45:12 -04:00
d0d0836abd Initial (haha) interactions.R refactor 2024-08-30 23:11:19 -04:00
17521b817f Output interaction df in calculate_interaction_zscores.R 2024-08-24 02:30:39 -04:00
3cb6e89360 Refine df filtering in calculate_interaction_zscores.R 2024-08-24 00:12:56 -04:00
dc5dea8bfc Add more output to calculate_interaction_zscores.R 2024-08-23 22:43:41 -04:00
b25dfb70b4 Rollup before java debug 2024-08-23 14:39:16 -04:00
3098a9dda5 Add untracked files 2024-08-23 04:01:30 -04:00
1502f6bf38 Implement calculate_interaction_zscores.R 2024-08-23 04:01:13 -04:00
bcc8dba3e4 Add new configuration file 2024-08-22 04:20:40 -04:00
a300484ceb interactions.R refactor 2024-08-19 03:15:29 -04:00
46f1e4d4d4 Rollup before configuration integration 2024-08-17 15:24:04 -04:00
d1380f9c3b Rollup for java clustering 2024-08-16 17:07:57 -04:00
38b3f66695 Rollup before removing NAs from joinInteractExps.R 2024-08-15 15:02:53 -04:00
6992d5eec0 Rollup before parallelization 2024-08-14 23:20:29 -04:00
1ba1f14537 Finish R script linting 2024-08-13 21:32:56 -04:00
79862ddab4 Lint R scripts 2024-08-13 15:59:18 -04:00
f190967383 Rollup 2024-08-13 15:27:53 -04:00
724b292dab Add workspace 2024-08-10 09:54:48 -04:00
db92aea17d Rollup interactions.R 2024-08-10 09:54:01 -04:00
9f541115eb interactions.R debugging 2024-08-04 23:06:10 -04:00
4059cc965f Fix RScript input 2024-08-04 23:01:10 -04:00
0715c2b150 QHTCP debugging 2024-08-04 22:52:46 -04:00
a44f7f143f QHTCP debugging 2024-08-04 22:50:01 -04:00
68dea8ecb4 Improve Study Info formatting 2024-08-04 22:19:36 -04:00
868e61d64f Improve Study Info formatting 2024-08-04 22:12:31 -04:00
735cd99644 Move R path to install_dependencies 2024-08-04 21:52:32 -04:00
7ea809e442 Move R path to install_dependencies 2024-08-04 21:44:05 -04:00
a451aa4783 Move R path to install_dependencies 2024-08-04 21:43:06 -04:00
1d4848c01e Move R path to install_dependencies 2024-08-04 21:41:55 -04:00
b77f459692 Move R path to install_dependencies 2024-08-04 21:38:33 -04:00