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964d2ad9b2
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Fix default error bar calculations
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2024-10-02 14:01:09 -04:00 |
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8e28accb80
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Add error bar color controls
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2024-10-02 13:49:49 -04:00 |
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6015f7faa8
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Add error bar color controls
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2024-10-02 13:47:57 -04:00 |
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df4c3352e3
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Fix interaction plot title OrfRep ref
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2024-10-02 13:34:17 -04:00 |
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211e793f00
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Fix error bars and points for interaction plots
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2024-10-02 13:07:07 -04:00 |
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5a3fcec55f
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Fix dataframe joining dimensionality
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2024-10-02 12:08:44 -04:00 |
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9769bae3d1
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Improve interaction plot groupings
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2024-10-02 11:02:40 -04:00 |
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ce32452920
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More nteraction score data structure improvements
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2024-10-02 06:08:46 -04:00 |
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9fee6bf8a5
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Fix interaction summarization
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2024-10-02 01:34:57 -04:00 |
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b0a41ac181
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Generate correlation lms separately
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2024-10-02 00:43:46 -04:00 |
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462d6070bd
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Fix discrete x_var mapping
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2024-10-01 18:54:19 -04:00 |
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1548dbf9c1
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Standardize plot groups
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2024-10-01 18:44:21 -04:00 |
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1e816e1a71
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Dynamically generate rank plot grids
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2024-10-01 15:28:13 -04:00 |
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e2479de3d7
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Use htmltools to combine html widgets into single file
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2024-10-01 15:24:25 -04:00 |
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8d398464e8
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Fix rank columns names
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2024-10-01 12:59:00 -04:00 |
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28edcd5f33
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Temporarily print plotly plots separately for debug
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2024-09-30 14:09:55 -04:00 |
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3d11ffbdbc
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Add pre-calculated error bars to scatter plots
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2024-09-30 02:21:54 -04:00 |
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039c6c1388
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Restore default aes colors
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2024-09-30 01:48:50 -04:00 |
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2f42357aa1
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Simplify plot config format
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2024-09-30 01:26:36 -04:00 |
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5d25b3c3ef
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Add jittering to interaction plots
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2024-09-29 18:36:55 -04:00 |
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c18f70a08a
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Refactor interaction plots to handle both reference and deletion scoring
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2024-09-29 17:39:17 -04:00 |
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f005155d08
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Improve interactions grids with gridExtra
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2024-09-29 02:15:06 -04:00 |
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376a299066
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Use sd bars, not se, in plate analysis plots
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2024-09-26 03:35:16 -04:00 |
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51aa2589be
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Use precomputed se values with Bessel's correction
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2024-09-26 02:52:09 -04:00 |
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fe9dfd9e38
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Plot tweaks for before QC
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2024-09-26 01:34:18 -04:00 |
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6256127279
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Break out aes mappings
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2024-09-25 22:45:39 -04:00 |
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a45b977b0d
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Add theme_publication() to generate_and_save_plots()
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2024-09-25 19:38:50 -04:00 |
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453c834566
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Copy original theme eactly and apply to plots
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2024-09-25 19:24:29 -04:00 |
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0d9f68537d
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Copy over more theme elements
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2024-09-25 18:59:37 -04:00 |
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4cab528772
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Sort experiments for analysis
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2024-09-25 18:48:56 -04:00 |
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302110bb9b
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Switch from theme_gray() to theme_foundation()
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2024-09-25 18:28:44 -04:00 |
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a4d08ad1a2
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Use if_all
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2024-09-25 16:59:52 -04:00 |
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cbe363e8ad
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Filter non-finite data for plate analysis plots
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2024-09-25 16:54:58 -04:00 |
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1661f913d8
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Standardize output filenames
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2024-09-25 15:15:48 -04:00 |
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b35966cb88
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Enable QC plots for comparison
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2024-09-25 14:04:32 -04:00 |
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964c1528c3
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Remove references to ranked df
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2024-09-25 02:48:06 -04:00 |
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c42e13d09f
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Simplify y-limits
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2024-09-25 02:33:52 -04:00 |
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57ff7698a3
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Fix Z_lm calculations
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2024-09-25 02:28:46 -04:00 |
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ad6e10e67d
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Remove superfluous filter function
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2024-09-25 02:12:06 -04:00 |
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fbbe351cbb
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Move ranks into rank_plots function
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2024-09-25 01:57:14 -04:00 |
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0836dc70d2
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Improve NA filtering
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2024-09-25 01:08:32 -04:00 |
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94c477ca28
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Fix bg data references
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2024-09-24 23:09:46 -04:00 |
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81174db065
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Put bg_stats into its own df to be reused
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2024-09-24 22:26:05 -04:00 |
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4741996694
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Align df handling closer to original script
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2024-09-24 22:17:09 -04:00 |
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eaf75f8892
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Preserve conc cols for later
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2024-09-24 20:40:09 -04:00 |
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89b32de29c
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Fix column naming derps
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2024-09-24 20:14:20 -04:00 |
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fea56ac7a9
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Revert to original column naming for Sum_Z_score
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2024-09-24 20:10:09 -04:00 |
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3c90c22a43
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Replace deprecated cur_data() with pick()
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2024-09-24 20:03:36 -04:00 |
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c7ad7246ee
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Redo interaction score groupings
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2024-09-24 20:02:02 -04:00 |
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5f1331f9a5
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Workaround bogus sd and se calculations
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2024-09-18 22:14:53 -04:00 |
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