38 lines
1.8 KiB
Plaintext
38 lines
1.8 KiB
Plaintext
# submodule mat_exp_frontend
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# # @description Run the ExpFrontend.m program
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# # This submodule:
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# # * Pushes into the Study template directory (ExpTemplate)
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# # * Prompts the user to run ExpFrontend.m
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# # * Pops out
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# # NOTES:
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# # * ExpFrontend.m should be or is being rewritten
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# mat_exp_frontend() {
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# debug "Running: ${FUNCNAME[0]}"
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# cat <<-EOF
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# ExpFrontend.m was made for recording into a spreadsheet
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# ('StudiesDataArchive.txt') the date and files used (i.e., directory paths to the
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# !!Results files used as input for Z-interaction script) for each multi-experiment study.
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# Run the front end MATLAB programs in the correct order (e.g., run front end in "exp1"
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# folder to call the !!Results file for the experiment you named as exp1 in the StudyInfo.csv file)
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# The GTA and pairwise, TSHeatmaps, JoinInteractions and GTF Heatmap scripts use this table
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# to label results and heatmaps in a meaningful way for the user and others.
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# The BackgroundSD and ZscoreJoinSD fields will be filled automatically according to user
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# specifications, at a later step in the QHTCP study process.
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# COpen MATLAB and in the application navigate to each specific /Exp folder,
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# call and execute ExpFrontend.m by clicking the play icon.
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# Use the "Open file" function from within Matlab.
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# Do not double-click on the file from the directory.
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# When prompted, navigate to the ExpJobs folder and the PrintResults folder within the correct job folder.
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# Repeat this for every Exp# folder depending on how many experiments are being performed.
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# The Exp# folder must correspond to the StudyInfo.csv created above.
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# EOF
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# script="ExpFrontend.m"
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# if ! ((YES)) &&
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# ask "Start MATLAB to run $script? This requires a GUI."; then
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# $MATLAB -nosplash -r "$script"
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# fi
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# }
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