459 lines
13 KiB
Matlab
Executable File
459 lines
13 KiB
Matlab
Executable File
%% CALLED WHEN ACCESSING 'CurveFit Display' %%
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function [scLst, row, col] = NCdisplayGui(projectScansDir)
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xPos=0.05;
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btnWid=0.10;
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btnHt=0.05;
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spacing=0.02; % Spacing between the button and the next command's label
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% Figure
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% The ADD Groups button
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btnNumber=1;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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row=1;
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',row,...
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'Units','normalized',...
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'Position', btnPos,... % [.002 .70 .08 .10],...
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'callback',{@editRowNum}); % 'Position', [5 100 60 20])
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function editRowNum(source,~)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<0)||(user_entry>17) )
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errordlg('Enter a Row between 1 and 16','Bad Input','modal')
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return
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end
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row=user_entry;
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end
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btnNumber=2;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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col=1;
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',col,...
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'Units','normalized',...
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'Position', btnPos,... % [.002 .70 .08 .10],...
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'callback',{@entryColNum}); % 'Position', [5 100 60 20])
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function entryColNum(source,~)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<0)||(user_entry>25))
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errordlg('Enter a Column between 1 and 24','Bad Input','modal')
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return
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end
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col=user_entry;
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end
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% Read in numeric folder names
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nlist=dir(fullfile(projectScansDir,'*'));
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nnn=0;
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for n=1:size(nlist,1)
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if (~isempty(str2num(nlist(n).name)))
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nnn=nnn+1;
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PnumLst(nnn)=(str2num(nlist(n).name));
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slst(nnn,1)={nlist(n).name};
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slst(nnn,1)={(nlist(n).name)};
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end
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end
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hListbox=uicontrol(...
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'Style', 'listbox',...
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'String',sort(slst),...
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'value',[],...
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'max',1000,...
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'min',1,...
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'Units','normalized',...
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'Position', [.40 .40 .10 .60],...
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'callback',{@load_listbox}); %'uiresume(gcbf)'); 'Position', [5 100 60 20])
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function load_listbox(source,~)
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userIndx=(get(source,'value'));
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userStr=(get(source,'string'));
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%scLstIndx=str2num(char(strrep(userStr(userIndx), 'Scan', '')))
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user_entry=userStr(userIndx);
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scLst=user_entry;
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end
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btnNumber=10;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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hedit8=uicontrol(...
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'Style', 'pushbutton',...
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'String',{'Continue'},...
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'Units','normalized',...
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'Position', btnPos,...
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'callback','uiresume(gcbf)');
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% Labels
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xLPos=0.175;
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yPos=0;
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btnWid=0.20;
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lblNumber=1;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','Row',...
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'Units','normalized',...
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'Position', btnPos);
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lblNumber=2;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','Column',...
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'Units','normalized',...
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'Position', btnPos);
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% Not needed for Ncode ImRobot
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uiwait(gcf);
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end %function end $$$$$[/INST]
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%}
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%{
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%-------------------333333-----------
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lblNumber=3;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','BG Threshold (%above) Detection',...
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'Units','normalized',...
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'Position', btnPos);
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%-------------------4-----------
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lblNumber=4;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','SpotDetThres(1-60%)',...
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'Units','normalized',...
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'Position', btnPos);
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%-------------------55555-----------
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lblNumber=5;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','Radius',... %'String','Width',...
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'Units','normalized',...
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'Position', btnPos);
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%-------------------66666-----------
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lblNumber=6;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','Dither',...
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'Units','normalized',...
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'Position', btnPos);
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%-------------------77777-----------
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lblNumber=7;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','SearchRange',...
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'Units','normalized',...
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'Position', btnPos);
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%-------------------88888-----------
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%{
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lblNumber=8;
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yPos=0.85-(lblNumber-1)*(btnHt+spacing);
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btnPos=[xLPos yPos-spacing btnWid btnHt];
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htxt=uicontrol(...
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'Style', 'text',...
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'String','Blank2',...
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'Units','normalized',...
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'Position', btnPos);
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%----------------------------------------
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%}
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%}
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%{
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%-------------------66666-----------
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btnNumber=6;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcExtendFactor=ImParMat(7);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcLoIntensThres,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@entryExtendFactor});
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function entryExtendFactor(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<1.8)||(user_entry>4.0))
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errordlg('You must enter a numeric value between 1.8 and 2.1','Bad Input','modal')
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return
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end
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ExtendFactor=user_entry
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ImParMat(7)= ExtendFactor
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ExtendFactor
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end
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%}
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%{
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%-------------------333333-----------
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btnNumber=3;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcBGthreshold=ImParMat(3);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcBGthreshold,...
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'Units','normalized',...
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'Position', btnPos,... % [.002 .70 .08 .10],...
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'callback',{@entryBGthreshold}); % 'Position', [5 100 60 20])
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function entryBGthreshold(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<1)||(user_entry>100))
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errordlg('Enter a numeric value between 1 and 100 percent to produce a Background Threshold value as a percent above the time series average background for each spot.','Bad Input','modal')
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return
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end
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BGthresInput=user_entry
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ImParMat(3)= BGthresInput
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BGthresInput
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end
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%-------------------444444-----------
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btnNumber=4; %Enter spot detection threshold (lock-in Image frame)
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcSpotThres=ImParMat(4);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcSpotThres,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@entrySpotThres});
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function entrySpotThres(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<1)||(user_entry>60))
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errordlg('You must enter a numeric value between 1 and 60','Bad Input','modal')
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return
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end
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spotThres=user_entry
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ImParMat(4)= spotThres
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spotThres
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end
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%
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%---------555555 Radius Entry After Sept.2014---------------------------------**
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btnNumber=5;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcRadius=ImParMat(10);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcRadius,...
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'Units','normalized',...
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'Position', btnPos,... % [.002 .70 .08 .10],...
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'callback',{@entryRadius}); % 'Position', [5 100 60 20])
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function entryRadius(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<12)||(user_entry>17))
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errordlg('You must enter a numeric value between 12 and 17','Bad Input','modal')
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return
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end
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Radius=user_entry
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ImParMat(10)= Radius
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Radius
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end
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%---------555555 Width Entry prior the Sept.2014---------------------------------**
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%{
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btnNumber=5;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcWidth=ImParMat(5);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcWidth,...
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'Units','normalized',...
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'Position', btnPos,... % [.002 .70 .08 .10],...
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'callback',{@entryWidth}); % 'Position', [5 100 60 20])
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function entryWidth(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<5)||(user_entry>41))
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errordlg('You must enter a numeric value between 5 and 40','Bad Input','modal')
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return
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end
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Width=user_entry
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ImParMat(5)= Width
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Width
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end
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%}
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%-------------------66666 Dither unnecessary after Sept.2014-----------
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btnNumber=6;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcDither= ImParMat(6);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcDither,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@entryDither});
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function entryDither(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<0)||(user_entry>5))
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errordlg('You must enter a numeric value between 1 and 4','Bad Input','modal')
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return
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end
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Dither=user_entry
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ImParMat(6)= Dither
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Dither
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end
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%-------------------77777----------- Added July 7,2015 to allow Search Range constraint
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btnNumber=7;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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try
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srchRange=ImParMat(12);
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searchRangeNum=ImParMat(12)
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catch %Legacy default value was 18 before being made a user input variable (ImParMat(12)). A preferable value now might be 12 or 14.
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srchRange=18;
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ImParMat(12)=18
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searchRangeNum=ImParMat(12)
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end
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%{
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if size(scLst)>1
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srchRange=ImParMat(12);
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else
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try
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srchRange=CSearchRange(str2double(scLst))
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catch
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srchRange=ImParMat(12);
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end
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end
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%}
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hSearchRange=uicontrol(...
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'Style', 'edit',...
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'String',srchRange,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@CsearchRange});
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function CsearchRange(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<1)||(user_entry>50)) %originally 18; 19_0729 increased
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errordlg('You must enter a numeric value between 1 and 18 12->18 recommended. (ImParMat(12)))','Bad Input','modal')
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return
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end
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searchRangeNum=user_entry
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end
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%-------------------77777-----------
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%{
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btnNumber=7;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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srcExtend=ImParMat(7);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcExtend,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@entryExtend});
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function entryExtend(source,eventdata)
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user_entry=str2double(get(source,'string'));
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if (isnan(user_entry)||(user_entry<-0.10)||(user_entry>0.4))
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errordlg('You must enter a numeric value between 0 and 0.4. 0.10 recommended','Bad Input','modal')
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return
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end
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extend=user_entry
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ImParMat(7)= extend
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extend
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end
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%-------------------888888-----------
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btnNumber=8;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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%ImParMat(8)=1;
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srcpointExtend=ImParMat(8);
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hedit=uicontrol(...
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'Style', 'edit',...
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'String',srcpointExtend,...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@entrypointExtend});
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function entrypointExtend(source,eventdata)
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user_entry=str2double(get(source,'string'));
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user_entry= floor(user_entry);
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if (isnan(user_entry)||(user_entry<-3)||(user_entry>5))
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errordlg('You must enter an integer value between 0 and 5. 1 recommended','Bad Input','modal')
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return
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end
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pointExtend=user_entry
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ImParMat(8)= pointExtend
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pointExtend
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end
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%}
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%-------------------999999-----------
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btnNumber=9;
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yPos=0.85-(btnNumber-1)*(btnHt+spacing);
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btnPos=[xPos yPos-spacing btnWid btnHt];
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hedit=uicontrol(...
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'Style', 'popupmenu',...
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'String',{'GrowthArea','FixedArea'},...
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'Units','normalized',...
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'Position', btnPos,...
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'callback',{@grwArea});
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function grwArea(source,eventdata)
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str=get(source, 'String');
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val=get(source,'Value');
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% Set current data to the selected data set.
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switch str{val};
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case 'GrowthArea' ;% User selects Peaks.
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SWgrowthArea=1
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case 'FixedArea' % User selects Membrane.
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SWgrowthArea=0
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end
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end
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%}
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