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Relocate project dir and relax linter

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This commit is contained in:
Bryan Roessler
2024-09-10 13:51:52 -04:00
parent 8ebb6ad265
commit 01752d20e3
2 changed files with 6 additions and 6 deletions
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2
qhtcp-workflow/.lintr
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@@ -4,6 +4,6 @@ linters: linters_with_defaults(
commented_code_linter = NULL, commented_code_linter = NULL,
trailing_whitespace_linter(allow_empty_lines = TRUE), trailing_whitespace_linter(allow_empty_lines = TRUE),
indentation_linter = NULL, indentation_linter = NULL,
line_length_linter = line_length_linter(140) line_length_linter = line_length_linter(145)
) )
encoding: "UTF-8" encoding: "UTF-8"

10
qhtcp-workflow/apps/r/calculate_interaction_zscores.R
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@@ -24,13 +24,13 @@ base_size <- 14
parse_arguments <- function() { parse_arguments <- function() {
args <- if (interactive()) { args <- if (interactive()) {
c( c(
"/home/bryan/documents/develop/scripts/hartmanlab/workflow/out/20240116_jhartman2_DoxoHLD/20240116_jhartman2_DoxoHLD", "/home/bryan/documents/develop/hartmanlab/qhtcp-workflow/out/20240116_jhartman2_DoxoHLD/20240116_jhartman2_DoxoHLD",
"/home/bryan/documents/develop/scripts/hartmanlab/workflow/apps/r/SGD_features.tab", "/home/bryan/documents/develop/hartmanlab/qhtcp-workflow/apps/r/SGD_features.tab",
"/home/bryan/documents/develop/scripts/hartmanlab/workflow/out/20240116_jhartman2_DoxoHLD/easy/20240116_jhartman2_DoxoHLD/results_std.txt", "/home/bryan/documents/develop/hartmanlab/qhtcp-workflow/out/20240116_jhartman2_DoxoHLD/easy/20240116_jhartman2_DoxoHLD/results_std.txt",
"/home/bryan/documents/develop/scripts/hartmanlab/workflow/out/20240116_jhartman2_DoxoHLD/20240822_jhartman2_DoxoHLD/exp1", "/home/bryan/documents/develop/hartmanlab/qhtcp-workflow/out/20240116_jhartman2_DoxoHLD/20240822_jhartman2_DoxoHLD/exp1",
"Experiment 1: Doxo versus HLD", "Experiment 1: Doxo versus HLD",
3, 3,
"/home/bryan/documents/develop/scripts/hartmanlab/workflow/out/20240116_jhartman2_DoxoHLD/20240822_jhartman2_DoxoHLD/exp2", "/home/bryan/documents/develop/hartmanlab/workflow/out/20240116_jhartman2_DoxoHLD/20240822_jhartman2_DoxoHLD/exp2",
"Experiment 2: HLD versus Doxo", "Experiment 2: HLD versus Doxo",
3 3
) )