Improve Study Info formatting
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@@ -1973,7 +1973,7 @@ get_studies() {
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next_study_entry="$empty_study,$PROJECT_SUFFIX,NA,NA,$INITIALS"
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echo "${underline}Study Info${nounderline}"
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echo "${underline}Study Info File${nounderline}"
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if [[ ! -f $1 ]]; then
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echo "Creating default $1"
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@@ -1984,8 +1984,8 @@ get_studies() {
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# Print current studies
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cat <<-EOF
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Give each experiment labels to be used for the plots and specific files.
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Enter the desired Experiment names and order them in the way you want them to appear in the REMc heatmaps
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* Give each experiment labels to be used for the plots and specific files.
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* Enter the desired Experiment names and order them in the way you want them to appear in the REMc heatmaps
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Current study info file:
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@@ -1997,9 +1997,17 @@ get_studies() {
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# Allow user to add/edit the study info file
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if ! ((YES)); then
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for ((i=1; i<2; i++)); do
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echo "Auto-entry suggestion: $next_study_entry"
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echo "Would you like to (a)dd the auto-entry, (e)dit the StudyInfo.csv file in nano, or (c)ontinue?"
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read -r -p "Hit [Enter] or c to continue: " response
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cat <<-EOF
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"Next entry suggestion: $next_study_entry"
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"Would you like to:
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* (a)dd the suggested entry
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* (e)dit the StudyInfo.csv file manually in nano
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* (c)ontinue?"
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EOF
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read -r -p "(c): " response
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echo ""
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[[ -z $response ]] && break
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case $response in
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a)
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